PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast01G185400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 589aa    MW: 63317.2 Da    PI: 8.4102
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast01G185400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.98.2e-23131435126
                 NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk...sgyWkatg 87 
                         f  hPtd el+++yLk+ v++ + +  ++i+++d+y ++P+dL +     +++ +++ wyfF++ + k+++g+rk+r++    +g W++  
  Brast01G185400.1.p  13 FSSHPTDLELIDNYLKPWVTTGERPW-KFIHDADVYAANPEDLSRtfspaMASDGQEAWYFFTPLRAKSRRGQRKSRTVGsgdDGCWHSER 102
                         5669*******************999.89**************844677555557779*******************876455789***** PP

                 NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmhey 126
                           k+++s   +++++g ++ + f ++ + + +++ W+m e 
  Brast01G185400.1.p 103 AAKPLFSGivHSRQIGYRQAFSFTTKVDGRLVRSGWLMAEI 143
                         ******9999999***********9999999*******997 PP

2NAM74.13.4e-233104367126
                 NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 
                          hP+d++l++ yL +++++ ++++ ++ ++vd+y +eP  L  +    +++ +ek wyfF++ + k  +g+r+ r++   +g W++    +
  Brast01G185400.1.p 310 KHPSDQDLIKSYLIPRIASGEHPC-KFTHDVDVYAAEPAVLSgQfspaTASDGEKAWYFFTTLRAKRIRGQRRPRTVGsgQGCWHSESGVR 399
                         59*******************999.89**************84366755666889********************86634788******** PP

                 NAM  91 evlskkgelvglkktLvfykgrapkge..ktdWvmhey 126
                         +v++ +++++g+++ + f k+++++g+  +t W+m e 
  Brast01G185400.1.p 400 DVFD-GDRQIGCRQFFSFMKKDEESGKslRTGWIMVEI 436
                         ****.999***********99888887669*****996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.7869163IPR003441NAC domain
PfamPF023656.9E-1411142IPR003441NAC domain
SuperFamilySSF1019412.75E-3113163IPR003441NAC domain
PROSITE profilePS5100529.427304458IPR003441NAC domain
PfamPF023651.1E-12306435IPR003441NAC domain
SuperFamilySSF1019411.7E-31308458IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    Send to blast
MAPIRRGAPR PDFSSHPTDL ELIDNYLKPW VTTGERPWKF IHDADVYAAN PEDLSRTFSP  60
AMASDGQEAW YFFTPLRAKS RRGQRKSRTV GSGDDGCWHS ERAAKPLFSG IVHSRQIGYR  120
QAFSFTTKVD GRLVRSGWLM AEIGLTPAGS SEEELVLCKV YRTPREAPPT GSTTAARRVG  180
PKIGRGKDGE CSASTEEKAS GAGPAKASVC SAQPPRASSS TDTAATESDS EQDSSSQAVI  240
DTSLSAAPLR AQIQRVIAGD AALTPCAEAC RPPQVPFLPS SPIRRTSAAP RVAAVPSGSS  300
APPPRPDFAK HPSDQDLIKS YLIPRIASGE HPCKFTHDVD VYAAEPAVLS GQFSPATASD  360
GEKAWYFFTT LRAKRIRGQR RPRTVGSGQG CWHSESGVRD VFDGDRQIGC RQFFSFMKKD  420
EESGKSLRTG WIMVEIGLNY GEHKGTSDEL VLYKVYRSPR AGPETDAQQS TAATESSGSK  480
RKASDENSGA ESPARGTKKS TALAASGRKK KTDDKNSGAA ACPPQLCTRC RIETAESHSG  540
TADEEDETRG GSETGLLEND SLTDESAAPR GHERGESSGS ARTFYRFV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-121116617171Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566991.10.0PREDICTED: uncharacterized protein LOC100830721
TrEMBLI1HQC20.0I1HQC2_BRADI; Uncharacterized protein
STRINGBRADI2G46430.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.21e-16NAC domain containing protein 47